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The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

2018 Membership and Responsibilities

Dear SEA-PHAGES Faculty,

We’re looking forward to the coming academic year, and its culmination in what will be the 10th Annual SEA-PHAGES Symposium at Janelia Research Campus on June 8-10, 2018. We are pleased that the program continues to be adopted by a variety of different institutions. This fall, seventeen new schools joined up ...

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Annotation Forum Reorganization

An Inherent Problem with Annotation

With the constant influx of new software tools, new genomes, and new publications, the way we annotate genomes is always changing. We always know a bit more than we did last year, and often a lot more than we did 5 years ago.

This leads to an inherent problem, however ...

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Sequencing Status 2016-17

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DNA Master Updated to Use Secure NCBI Connections

Thanks to Jeffrey Lawrence, significant changes have been made to the DNA Master code which now allow it to access the newly-secure servers of NCBI. To obtain these changes, you need to update the program. Without updating, important features of DNA Master will not work, including auto-annotation and BLASTing.

To update, open DNA Master then ...

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DNA Master Under Construction

Dear All,

NCBI is upgrading its security protocols for programs that contact its servers. DNA Master uses the NCBI servers for both BLAST data and for auto-annotations. At the current time, we have been unable to upgrade DNA Master to use the new protocols, which means auto-annotations and BLASTing through DNA Master will fail.

We ...

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2016 Sequencing Information

Sequencing time of year approaches once again!

Remember that each SEA-PHAGES school can have two genomes sequenced per in silico section they are teaching this year. We recommend that you send at least one backup sample in case one of your samples fails our QC. Please indicate any order of preference, if you have one ...

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2016 Fall Archive Tubes

Archive tubes were shipped this week. Expect them no later than Thursday, November 3, 2016.

A couple small changes to seaphages.org

Navigation Menus

Just a quick alert that sometime in the next couple of weeks, we'll be slightly changing the menus that appear at the top of seaphages.org. The current menus were just sort of tacked-together as we built the site, and so hopefully the rearrangement will be a bit more intuitive, but feedback ...

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Accepting Applications for 2017-18

HHMI has released a call for applications for new schools to join the SEA-PHAGES program for the 2017-18 academic year. Any schools that are interested can view application instructions and materials at the link below.

Application Materials

Message in a Bottle, issue 6

The new issue of Message in a Bottle is available! Download it here.

Welkin

Yearly archives

Current Events

Virtual Site-Visit with SEA Team

September 1, 2019 to October 31, 2019

Upcoming Events

Phall Phage Phair - 2019

November 8, 2019

Philly Phage Phestival - 2019

November 16, 2019

Bioinformatics Workshop

December 9, 2019 to December 13, 2019

Recent Events

Identify Bioinformatics Workshop Trainees

October 2, 2019

Phage Discovery Workshop 12B

July 7, 2019 to July 13, 2019

Forum Activity

afreise posted in Terminase, large subunit

Debbie Jacobs-Sera posted in non SEA-PHAGES genomes

afreise posted in non SEA-PHAGES genomes

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