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The official website of the HHMI Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science program.

Posts by: Dan

Sequencing Status 2019-2020

Below is a live spreadsheet showing the status of SEA-PHAGES sequencing samples for the 2019-20 academic year. Generally, only samples in the "priority" queue will be listed, and it may take a few days after receipt of samples for them to appear.

CLICK HERE to open this in a new browser window.

 

2019 SEA-PHAGES Annual Letter

The 2019 SEA-PHAGES letter is available in pdf format by clicking here, or you can read the text below.

Dear SEA-PHAGES Community,

The 2019 SEA-PHAGES Annual Symposium marks yet another highly successful year with a plethora of exciting events. The program continues to expand with inclusion of a new cohort of schools and we are ...

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GenBank Submission Numbers

Below is a live spreadsheet showing the numbers assigned by GenBank to phage annotations that have been submitted and are soon to be (or have been) released.

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Sequencing Information 2018-19

This post contains some information on sending your SEA-PHAGES phage DNA samples to the University of Pittsburgh for sequencing.

Sample Submission Form: NEW!

New this year! We are now requiring you to submit the information about the samples you are sending via a quick Google Form. This will help us keep track of samples, correct ...

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Sequencing Status 2018-19

Below is a live spreadsheet showing the status of SEA-PHAGES sequencing samples for the 2018-19 academic year. Generally, only samples in the "priority" queue will be listed, and it may take a few days after receipt of samples for them to appear.

CLICK HERE to open this in a new browser window.

 

2018 SEA-PHAGES Annual Letter

Below, find the first SEA-PHAGES Annual Letter, written in 2018 for the 2017-18 academic year. We hope to continue to write a summary of accomplishments, developments, and plans at the conclusion of each year.

Click here to download a pdf version of the letter.

Dear SEA-PHAGES Community,

The 2018 Symposium is a red-letter event, reflecting ...

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Sequencing Status 2017-18

Below is a live spreadsheet showing the status of SEA-PHAGES sequencing samples for the 2017-18 academic year. Generally, only samples in the "priority" queue will be listed, and it may take a few days after receipt of samples for them to appear.

CLICK HERE to open this in a new browser window.

Official Function List

Embedded below is the list of approved functions and specific names for those functions. Any functional calls you make should come from this list and use the naming conventions here. If you think you've found a function not on this list, please request that it be added at the appropriate forum.

CLICK HERE to ...

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2018 Membership and Responsibilities

Dear SEA-PHAGES Faculty,

We’re looking forward to the coming academic year, and its culmination in what will be the 10th Annual SEA-PHAGES Symposium at Janelia Research Campus on June 8-10, 2018. We are pleased that the program continues to be adopted by a variety of different institutions. This fall, seventeen new schools joined up ...

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Annotation Forum Reorganization

An Inherent Problem with Annotation

With the constant influx of new software tools, new genomes, and new publications, the way we annotate genomes is always changing. We always know a bit more than we did last year, and often a lot more than we did 5 years ago.

This leads to an inherent problem, however ...

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Current Events

Virtual Site-Visit with SEA Team

September 1, 2019 to October 31, 2019

Upcoming Events

Philly Phage Phestival 2019

November 16, 2019

Bioinformatics Workshop

December 9, 2019 to December 13, 2019

2018 Bioinformatics Workshop

December 9, 2019 to December 13, 2019

Recent Events

Identify Bioinformatics Workshop Trainees

October 2, 2019

Phage Discovery Workshop 12B

July 7, 2019 to July 13, 2019

Forum Activity